Source: ALL

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs7097397
rs7097397
WDFY4
0.925 0.120 10 48817351 missense variant G/A snv 0.38 0.31
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2014 2014
dbSNP: rs3115671
rs3115671
VWA7 ; SAPCD1-AS1
1.000 0.120 6 31766568 synonymous variant G/T snv 6.3E-02 7.9E-02
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs707928
rs707928
VWA7
0.827 0.320 6 31774813 intron variant A/G snv 0.47
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs707929
rs707929
VWA7
1.000 0.120 6 31774290 intron variant A/G snv 0.46
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs213199
rs213199
VPS52
1.000 0.120 6 33267978 synonymous variant G/A snv 0.39 0.40
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs595158
rs595158
VPS37C
1.000 0.120 11 61142109 intron variant C/A;T snv
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.800 1.000 1 2012 2012
dbSNP: rs1222213359
rs1222213359
VEGFA
0.574 0.720 6 43770966 missense variant G/A snv
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.040 1.000 4 2005 2018
dbSNP: rs2010963
rs2010963
VEGFA
0.542 0.840 6 43770613 5 prime UTR variant C/G snv 0.68
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.040 0.750 4 2005 2013
dbSNP: rs3025039
rs3025039
VEGFA
0.576 0.720 6 43784799 3 prime UTR variant C/T snv 0.13
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.030 0.667 3 2011 2013
dbSNP: rs1570360
rs1570360
VEGFA
0.641 0.680 6 43770093 upstream gene variant A/G snv 0.76
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.020 1.000 2 2005 2011
dbSNP: rs699947
rs699947
VEGFA
0.570 0.680 6 43768652 upstream gene variant A/C;T snv
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.020 1.000 2 2011 2013
dbSNP: rs833070
rs833070
VEGFA
0.776 0.440 6 43774889 non coding transcript exon variant T/C snv 0.58
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.020 1.000 2 2011 2016
dbSNP: rs3025030
rs3025030
VEGFA
0.882 0.200 6 43782850 non coding transcript exon variant G/C snv 0.13
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2016 2016
dbSNP: rs2228570
rs2228570
VDR
0.521 0.760 12 47879112 start lost A/C;G;T snv 0.63
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2012 2012
dbSNP: rs3890733
rs3890733
VDR
0.882 0.120 12 47895590 intron variant C/T snv 0.27
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2016 2016
dbSNP: rs4760648
rs4760648
VDR
0.851 0.200 12 47886882 intron variant C/A;G;T snv
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2016 2016
dbSNP: rs749140677
rs749140677
VDR
0.752 0.240 12 47857185 missense variant G/A snv 8.0E-06
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2015 2015
dbSNP: rs764054471
rs764054471
VDR
0.925 0.160 12 47879101 missense variant C/T snv 2.4E-05 2.1E-05
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2013 2013
dbSNP: rs7975232
rs7975232
VDR
0.576 0.760 12 47845054 intron variant C/A snv 0.51 0.55
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2016 2016
dbSNP: rs3783613
rs3783613
VCAM1
0.851 0.200 1 100731231 missense variant G/A;C snv 4.0E-06; 9.9E-03
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2009 2009
dbSNP: rs12979659
rs12979659
VAV1
0.925 0.160 19 6825021 intron variant T/C snv 0.36 0.28
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2017 2017
dbSNP: rs2546133
rs2546133
VAV1
0.925 0.160 19 6799666 intron variant T/A;C snv
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2017 2017
dbSNP: rs2617822
rs2617822
VAV1
0.925 0.160 19 6801470 intron variant G/A;C snv
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2017 2017
dbSNP: rs682626
rs682626
VAV1
0.925 0.160 19 6774058 intron variant G/A;T snv
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2017 2017
dbSNP: rs1264302
rs1264302
VARS2
1.000 0.120 6 30914857 synonymous variant C/T snv 0.32 0.28
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009